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  <front>
    <journal-meta id="journal-meta-43c164b2d33c49e18f1085f1fed05415">
      <journal-id journal-id-type="nlm-ta">Sciresol</journal-id>
      <journal-id journal-id-type="publisher-id">Sciresol</journal-id>
      <journal-id journal-id-type="journal_submission_guidelines">https://www.jcbsonline.ac.in/</journal-id>
      <journal-title-group>
        <journal-title>Journal of Clinical and Biomedical Sciences</journal-title>
      </journal-title-group>
      <issn publication-format="electronic">2319-2453</issn>
      <issn publication-format="print"/>
    </journal-meta>
    <article-meta id="article-meta-1474246d9a0e47ffbdabb182e5b2132a">
      <article-id pub-id-type="doi">10.58739/jcbs/v15i1.136</article-id>
      <article-categories>
        <subj-group>
          <subject>RESEARCH ARTICLE</subject>
        </subj-group>
      </article-categories>
      <title-group>
        <article-title id="article-title-b6eaa71b66eb468787372265edb9b96f">
          <bold id="strong-01924946e8bc4d40b3f3332dc64e1aa8">Isolation and Characterization of Antioxidant-Producing Thermophilic Bacteria from </bold>
          <bold id="strong-4a7a0237ac8e428eaa07f26485b2e144">Tatapani</bold>
          <bold id="strong-53155fe763a246bbaa1d88bdd568dd3f"> Hot Spring, Chhattisgarh, India</bold>
        </article-title>
        <alt-title alt-title-type="right-running-head">Antioxidant potential of thermophilic bacteria</alt-title>
      </title-group>
      <contrib-group>
        <contrib contrib-type="author">
          <name id="name-d09b8f37747941a9ba2c887daeabeca0">
            <surname>Arora</surname>
            <given-names>Ragini</given-names>
          </name>
          <xref id="xref-f415a960767b402ba65877db57aca7de" rid="aff-912aa1ffb27e4b8d854a9532581b0d11" ref-type="aff">1</xref>
        </contrib>
        <contrib contrib-type="author" corresp="yes">
          <name id="name-4ba7ca96c42a497ca9b732e0ddb9c8a3">
            <surname>Jha</surname>
            <given-names>Harit</given-names>
          </name>
          <email>harit74@yahoo.co.in</email>
          <xref id="xref-babf979e650242638ad0c58114915050" rid="aff-912aa1ffb27e4b8d854a9532581b0d11" ref-type="aff">1</xref>
        </contrib>
        <aff id="aff-912aa1ffb27e4b8d854a9532581b0d11">
          <institution>Department of Biotechnology, Guru Ghasidas Vishwavidyalaya</institution>
          <addr-line>Bilaspur, Chhattisgarh</addr-line>
          <country country="IN">India</country>
        </aff>
      </contrib-group>
      <volume>15</volume>
      <issue>1</issue>
      <fpage>38</fpage>
      <permissions>
        <copyright-year>2025</copyright-year>
      </permissions>
      <abstract id="abstract-abstract-title-dade90071ac7438fb5c7031711ac29ed">
        <title id="abstract-title-dade90071ac7438fb5c7031711ac29ed">Abstract</title>
        <p id="paragraph-6a73513f6b484feda476c51d721e30f8"><bold id="strong-12eaffcc0225470b8370eb12a60a0272">Background: </bold>Oxidative stress, caused by an imbalance between reactive oxygen species (ROS) and antioxidant defences, is implicated in numerous degenerative diseases. The search for natural antioxidants has led to the exploration of thermophilic bacteria, known for thriving in extreme environments and potentially producing potent antioxidant compounds.<bold id="strong-c48bd02cb14c4b999a7b2c79a5b109d9"> Objective: </bold>The purpose of this study was to isolate and characterize thermophilic bacteria collected at Tatapani Hot Spring and evaluate their antioxidant potential.<bold id="strong-5b369d4fbe5c438fa5db84303761baf0"> Methods: </bold>Water samples were collected from Tatapani Hot Spring and subjected to bacterial isolation using the Spread Plate and Enrichment Culture Method. Isolated strains were characterized morphologically, biochemically, and molecularly via 16S rRNA gene sequencing. Carotenoids and quinones were extracted from the fermentation medium and analyzed for antioxidant activity using UV-Visible spectroscopy. The antioxidant potential of the extracts was assessed through various assays, including DPPH radical scavenging, hydroxyl radical scavenging, nitric oxide radical scavenging, and Ferric ion reducing antioxidant power (FRAP) assays. <bold id="strong-17bf24378669418aa87206393d50df15">Results: </bold>Two thermophilic bacterial strains, referred to as TR1 and TR2, were successfully isolated. Both strains are Gram-positive, endospore-forming rods. Strain TR1 exhibited 98.70% sequence similarity to<italic id="e-3dac899c77cc"> Bacillus nakamurai</italic>, while strain TR2 showed 99.65% similarity to <italic id="e-cbab284c8aac">Bacillus licheniformis</italic>. Extracts from these strains revealed significant antioxidant activities, with ethanol extracts demonstrating superior efficacy. Specifically, the ethanol-dissolved extracts exhibited DPPH radical scavenging activity of approximately 80%, hydroxyl radical scavenging activity up to 95.5%, and nitric oxide radical scavenging activity around 87.4%. The FRAP assay confirmed the strong reducing power of the extracts.<bold id="strong-61adf3257d2b486bb1253d98229bb99c"> Conclusion: </bold>The thermophiles collected at Tatapani Hot Spring produce potent antioxidant compounds, primarily carotenoids and quinones, with substantial scavenging activities. These findings highlight the potential of these bacteria as sources of natural antioxidants for applications in pharmaceuticals, nutraceuticals, and cosmetics. Future research should focus on optimizing the extraction processes and further characterizing these bioactive compounds to fully exploit their therapeutic potential.</p>
        <p id="p-fcf2baa1d063"><bold id="strong-1">Keywords: </bold>Thermophilic bacteria; Antioxidant activity; <italic id="emphasis-1">Bacillus</italic> species; Bioactive compounds<bold id="strong-2"/></p>
      </abstract>
      <kwd-group id="kwd-group-8f48e2c8c04c4bcd8ce3776af72a39d9">
        <title>Keywords</title>
        <kwd/>
      </kwd-group>
      <funding-group>
        <funding-statement>None</funding-statement>
      </funding-group>
    </article-meta>
  </front>
  <body>
    <sec>
      <title id="title-4acdb5bfaec440289ac5648617e2fb9f">1 Introduction</title>
      <p id="paragraph-8818df5392de4fc7a68f4762df75728c">Antioxidants have a key role in neutralizing oxidative stress, which occurs when there is an imbalance between reactive oxygen species (ROS) and the body's ability to detoxify these reactive intermediates or repair the resulting damage. ROS, including free radicals like superoxide anion and hydroxyl radical, as well as non-radical molecules like hydrogen peroxide, are highly reactive and can damage cellular components such as DNA, proteins, and lipids. Oxidative damage plays a key role in the development of numerous degenerative diseases, including cancer, cardiovascular diseases, diabetes, and neurodegenerative disorders like Alzheimer's and Parkinson's disease. <xref id="xref-02acec88463e43cdbfc308ba9ad5d479" rid="R264517132984257" ref-type="bibr">1</xref><bold id="strong-090def223b0244129fcd1e42db5329c1"><sup id="superscript-22322a98ad4e47fb86bbc79950cef702"> </sup></bold>Additionally, oxidative stress accelerates the aging process and contributes to chronic inflammation, further exacerbating health issues. Antioxidants counteract ROS by donating electrons or hydrogen atoms to neutralize these reactive species, thus preventing cellular damage and maintaining redox homeostasis. Natural bacterial sources of antioxidants have emerged as significant contributors to the body's antioxidant defense mechanisms, providing a promising alternative to synthetic antioxidants. <xref id="xref-6570e15e26f644f0b6ea9067e3e2551d" rid="R264517132984253" ref-type="bibr">2</xref> </p>
      <p id="paragraph-bf25e556d1294ee786903af278f53ff8">Thermophilic bacteria, thriving in the extreme conditions of Tatapani Hot Spring in Chhattisgarh, India, have garnered significant scientific interest due to their unique metabolic processes and potential applications, particularly their antioxidant activity<bold id="strong-cf10d44785a74a32886bf659c80250fa">.</bold> These bacteria, adapted to survive at high temperatures, typically between 45°C and 80°C, exhibit remarkable stability and robustness. The extreme environment of Tatapani Hot Spring has led to the evolution of resilient bacterial species that produce powerful antioxidant compounds to survive and thrive. The high-temperature environment challenges these bacteria to maintain cellular integrity and function, prompting the production of highly effective antioxidant metabolites<bold id="strong-bdad3aca9b0e40bea09b95545fe6f2b1">.</bold></p>
      <p id="paragraph-ac80b963e25a41f0bd63da4daa26289a">These secondary metabolites include an array of bioactive compounds, with carotenoids and quinones distinguished by their potent antioxidant properties<bold id="strong-3d3a369665f14c95b81c2ba81c7bcba2">.</bold> Carotenoids are known for their ability to quench singlet oxygen, a highly reactive form of oxygen. This ability to stabilize free radicals by accepting or donating electrons helps prevent lipid peroxidation and protects cellular membranes from oxidative damage<bold id="strong-fd29ee5886974bf99426b5d6be7e4725">.</bold> Carotenoids also enhance antioxidant defence by interacting synergistically with other antioxidants, such as vitamin E, regenerating their active forms and amplifying their protective effects. Additionally, carotenoids can modulate gene expression related to oxidative stress response, further contributing to cellular protection. The robust antioxidant activity of carotenoids is attributed to their conjugated double-bond structures, which allow them to effectively interact with and neutralize ROS.</p>
      <p id="paragraph-d5d7fdc05f8f4a59bc9320c6f7dc17f0">Quinones, another significant group of antioxidant compounds produced by these thermophilic bacteria, play a crucial role by undergoing redox cycling. This process allows quinones to alternate between oxidized and reduced states, thereby neutralizing ROS and maintaining cellular redox homeostasis<bold id="strong-a1a7dabe289a4a158d7ee73f8c7400a7">.</bold> Quinones also act as electron carriers in the electron transport chain, facilitating energy production while mitigating oxidative stress. Beyond their direct antioxidant effects, quinones can influence various cellular signaling pathways involved in stress  responses and apoptosis, thereby enhancing the cell's overall antioxidant capacity and resilience to oxidative damage. <xref id="xref-65d16d6c72a04d509d4a5324695c44d3" rid="R264517132984261" ref-type="bibr">3</xref><bold id="strong-9b86582896ad4001bd379d392d683f66"><sup id="superscript-cc043ea945b441da939745f7c44b576d"> </sup></bold>The diverse structural configurations of quinones contribute to their ability to participate in a ﻿diverse array of redox reactions, providing versatile protection against oxidative stress. <xref id="xref-ff8e9a86b9be4d8580aa0f79da4b8c9c" rid="R264517132984242" ref-type="bibr">4</xref></p>
      <p id="paragraph-5907a4f9544c47a4aeb2ef4d870bbc39">Investigating the antioxidant potential in thermophilic bacteria isolated from Tatapani Hot Spring not only enhances our understanding of their survival mechanisms but also opens avenues for discovering new therapeutic agents. These naturally occurring antioxidants from thermophilic bacteria offer a sustainable and effective alternative to synthetic antioxidants in the pharmaceutical, nutraceutical, and cosmetic industries. The extraction and characterization of these metabolites could lead to the development of novel antioxidant formulations, targeting specific oxidative stress-related conditions. Thus, studying the secondary metabolites of these bacteria is crucial for bioprospecting novel antioxidants, potentially leading to significant advancements in health sciences and biotechnological innovations. <xref id="xref-02f3127b19d842b5b8813a4325a7b1cf" rid="R264517132984251" ref-type="bibr">5</xref></p>
    </sec>
    <sec>
      <title id="title-cb13d0c5442441b5bbf02fb1a32543d5">2 Material and Methods</title>
      <sec>
        <title id="t-b14cb988df2f">2.1 <bold id="strong-d5131a39198c4b35a84ca73de6453d8c">Chemicals and Reagents</bold></title>
        <p id="paragraph-3910b93cd6964af388045df7a1df7033">All solvents, chemicals, and media used in this research were of analytical grade, obtained from Sigma-Aldrich. Pure bacterial cultures were sub-cultured on nutrient agar slants to ensure fresh cultures were available the day before each experimental procedure.</p>
      </sec>
      <sec>
        <title id="t-17d82a270f26">2.2 <bold id="strong-ea798febfe994ef99bfb3c1a3f5d9ff9">Isolation of Thermophilic Bacteria from Collected Water Samples</bold></title>
        <p id="paragraph-6a29d47fd0144b6da27cba9b5c24814f">Twelve water samples were collected from Tatapani hot spring in Chhattisgarh using 200 mL sterile thermal glass containers. Located in the small village of Tatapani, Sarguja district (23.8275° N, 83.2977° E), samples were taken in triplicate from the same spot at depths of 10, 20, 30, and 40 cm. They were refrigerated at 4°C to maintain their physico-chemical and biological properties. Temperature and conductivity were measured with a thermometer and conductivity meter, respectively. The samples exhibited temperatures ranging from 47–62°C, pH levels between 7.1–7.6, and electrical conductivity of 1240–1300 µS/cm.</p>
        <p id="paragraph-a4d567004cb44975b4881d8a72ced4a3">The Spread Plate and Enrichment Culture Method was employed for bacterial isolation using Nutrient Agar medium (NAM) adjusted to pH 6.8, containing 10 g peptone, 5 g yeast extract, 5 g sodium chloride, and 15 g agar per litre. Plates were inoculated and then incubated at temperatures ranging from 50°C to 80°C for 18 hours to enable the growth and isolation of thermophilic bacteria. Post-incubation, distinct bacterial colonies were identified and subsequently sub-cultured onto fresh NAM plates to ensure pure cultures. These isolated strains were preserved and maintained under refrigeration in the laboratory. <xref id="xref-8883050130424fa69c39f32a011465ad" rid="R264517132984244" ref-type="bibr">6</xref></p>
      </sec>
      <sec>
        <title id="t-9c3d53163b6a">2.3 <bold id="strong-3cac096f4f8a41898902b62b6a79de3b">Comprehensive Characterization of Bacterial Isolates: Colony Morphology, Biochemical Properties, and Growth Conditions</bold></title>
        <p id="paragraph-d9b8f5fc12704d539041d93e4eb93e72">The bacterial isolates were analysed using a Zeiss compound microscope (AXIO SCOPE.A1 HBO 50, Zeiss, Germany) for Gram staining, Endospore staining, and colony morphology assessment. After incubation for 48 hours on selective medium maintained at 55°C, colony characteristics including color, size, shape, elevation, margin appearance, and surface texture were evaluated<bold id="strong-73141d39d91d46868564b958f31927e3">.</bold> Biochemical characterization involved conducting starch hydrolysis, Voges-Proskauer reaction, catalase activity, carbohydrate utilization (glucose, lactose, sucrose), indole production, methyl-red test, urease activity, citrate utilization, oxidase test, and nitrate reduction assays.<xref id="xref-cadc5f61695f4a0488b179d847b0c082" rid="R264517132984247" ref-type="bibr">7</xref> To assess the growth temperature range, the bacterial cultures were incubated at 0°C, 10°C, 37°C, 45°C, 55°C, 60°C, 65°C, 70°C, and 80°C. The pH tolerance was assessed by inoculating the strains in media adjusted to pH levels of 2, 4, 6, 7, 10, and 13. To evaluate salt tolerance, the isolates were cultured in media containing various concentrations of sodium chloride (0.1%, 0.2%, 0.4%, 0.5%, 1%, 2%, and 5%). These assays provided comprehensive insights into metabolic capabilities crucial for assessing therapeutic potential, while growth conditions were rigorously controlled to ensure accurate characterization.</p>
      </sec>
      <sec>
        <title id="t-c531981de314">2.4 <bold id="strong-19af437b9a2a4544b0a066196ccb8311">Molecular Characterization of Bacterial Isolates using 16S rRNA Gene Sequencing</bold></title>
        <p id="paragraph-41a9a82d67724fbc986afcc773267a28">Chromosomal DNA was extracted using a spin column kit (e.g., HiMedia, India) following the manufacturer's specifications. The 16S rRNA gene was PCR-amplified using 704F (690 bp) and 907R (861bp) primer.<xref id="xref-985f2a45f87646f9a20f0ad883c8b661" rid="R264517132984255" ref-type="bibr">8</xref> The PCR products were purified using Exonuclease I - Shrimp Alkaline Phosphatase (Exo-SAP) enzymatic treatment <xref id="xref-13b54223cf74422f9f2e4640b285f33f" rid="R264517132984252" ref-type="bibr">9</xref> and sequenced using the Sanger method on an ABI 3500xL genetic analyzer (Life Technologies, USA). The resulting .ab1 files were edited with CHROMASLITE (version 1.5) for accurate base calling. Sequence analysis was conducted using BLAST against the NCBI database to identify the closest matches, and the bacteria were assigned unique GenBank Accession numbers. A phylogenetic tree was constructed using Mega 6 software, comparing the bacterial sequences to 32 similar ones using the Maximum Likelihood approach and Kimura 2-parameter model to elucidate their evolutionary relationships.</p>
      </sec>
      <sec>
        <title id="t-a7ec95e58f43">2.5 <bold id="strong-ab2024f2c873406b8b7728aef161284c">Deposition of 16S rRNA Gene Sequences to the GenBank Database</bold></title>
        <p id="paragraph-f1de6709e9034a7a96186deda9a81faa">The bacterial strains' 16S rRNA gene sequences were deposited in the GenBank database using the Blankit program provided by NCBI. Accession numbers for the strains were obtained through the submission process facilitated by NCBI.</p>
      </sec>
      <sec>
        <title id="t-ec8af5ef4af1">2.6 <bold id="strong-a71660793e6b4c1d82244406e6eeaa96">Multi-Step Extraction and Characterization of Bioactive Compounds from Fermentation Medium</bold></title>
        <p id="paragraph-59f0b4adea2445a5a23b565027aca775">The extraction of bioactive compounds involves producing the active component in an optimized fermentation medium, followed by incubation and centrifugation to collect the supernatant.<xref id="xref-5e87cec7bdec449faf82393182376e68" rid="R264517132984259" ref-type="bibr">10</xref> Deproteinization is achieved using perchloric acid and subsequent neutralization with KOH. <xref id="xref-6d70af72159f4fa3beafeacd05ca9919" rid="R264517132984256" ref-type="bibr">11</xref><bold id="strong-dc836de8eaab4bdf8e288e9bdaf6c53c"> </bold>The broth undergoes gel adsorption with activated silica gel and successive solvent extraction. The extracts are analyzed using UV-Vis spectrophotometry, providing detailed insights into their chemical structures and properties.<xref id="xref-ac0af64413d84255b29fd6888e3f3ada" rid="R264517132984243" ref-type="bibr">12</xref> This multi-step process ensures thorough separation, identification, and characterization of bioactive compounds.<bold id="strong-977f313b19f549c7be5e1db2d5d502cb"><sub id="subscript-7f222f688b6f4cb4b4b7cea6f6ff7ca9"> </sub></bold><xref id="xref-7734a8b4f87c49aab0a7a787d273c0d9" rid="R264517132984245" ref-type="bibr">13</xref> </p>
      </sec>
      <sec>
        <title id="t-e183c2a0a1e0">2.7 <bold id="strong-e0ec40254ee541afa66e548083eacce1">Antioxidant Assays</bold></title>
        <p id="paragraph-b77800696ba54902b626aeeffeb6f5c0">Isolates from Nutrient Agar Medium (NAM) were first cultured in 15 ml of Nutrient Broth and incubated at 55°C for 24 hours.<bold id="strong-a34123288b3a4bec812bb09b1050c885"><sup id="superscript-d2f7eb5c435a40acab7236e0e8fab78b"> </sup></bold><xref id="xref-a719210c259a47229a36bdbe03b0e5ca" rid="R264517132984248" ref-type="bibr">14</xref> This pre-culture was then used to inoculate 50 ml of the same culture medium in 100 ml conical flasks.<xref id="xref-ab9e9368c6a4418bb911d1889b1fd779" rid="R264517132984260" ref-type="bibr">15</xref> The flasks were incubated at 55°C for 36-48 hours with intermittent shaking to promote microbial growth and compound production. After incubation, the mixture was filtered to separate the precipitate from the supernatant, which was then analyzed for bioactive compounds. <xref id="xref-6451a76b56614decbd82fce8cea0f52c" rid="R264517132984249" ref-type="bibr">16</xref></p>
        <sec>
          <title id="t-22d5621ec563">2.7.1 <bold id="strong-71798c48be374471b33fddd0c32e50fa">DPPH Assay</bold></title>
          <p id="paragraph-9530d9fc26a54e89bc2df0851b2dccfb">The DPPH radical scavenging assay was performed with modifications.<bold id="strong-3650745d1a444fb38f6e70947cce9c0d"><sup id="superscript-c88fc6825ba6457c8ad6c56df05821b2"> </sup></bold><xref id="xref-e404c6321e52485a8e09edc8afd0edd4" rid="R264517132984258" ref-type="bibr">17</xref> DPPH solution was prepared by dissolving 2 mg of DPPH in 54 ml of methanol. Control solutions contained 3 ml of this DPPH solution, while the blank solution was made by adding 300 μl of distilled water to 2700 μl of 100% methanol. Sample solutions were formulated by mixing 300 μl of the supernatant with 2700 μl of the DPPH solution. Both control and sample solutions were incubated in the dark at room temperature for a duration of 30 minutes before measuring absorbance at 517 nm. The results were presented as ascorbic acid equivalents, calculated using the formula: Δ Sample = A0 of sample – A30 of sample and Δ Standard = A<sub id="subscript-695e49fc6c7e432a9caa70b4d10ff2c3">0</sub> of ascorbic acid – A<sub id="subscript-4ac3599007004cfe9e9b86b9ba7b4269">30</sub> of ascorbic acid. DPPH radical inhibition percentage was graphed against the sample concentration to assess antioxidant activity. The IC50 values were calculated, indicating the concentration required to inhibit 50% of DPPH radical activity.</p>
        </sec>
        <sec>
          <title id="t-aa3e57db62cf">2.7.2 <bold id="strong-e2e0d08012da43689da3e80eb8231a1f">Hydroxyl Radical Scavenging assay</bold></title>
          <p id="paragraph-1c37da7dd40f4441a4b1735254794734">The hydroxyl radical antioxidant assay was conducted as follows. A 1 mM stock solution of salicylic acid, the probe molecule, was formulated in phosphate buffer (pH 7.4).<xref id="xref-cb4857bff1ef497aa098ea70396d0296" rid="R264517132984246" ref-type="bibr">18</xref> Hydroxyl radicals were generated by adding 1 mL of 1 mM FeSO<sub id="s-4b0e3807331a">4</sub> (iron (II) sulfate) with 1 mL of 1 mM hydrogen peroxide (H<sub id="s-41f4541ad2a2">2</sub>O<sub id="s-29a0019158ec">2</sub>).<xref id="xref-2b8fde1245f94c7f9dc1f0bcfe107dbe" rid="R264517132984250" ref-type="bibr">19</xref> Test samples and antioxidant standards were diluted to concentrations of 0.1, 0.5, 1.0, 5.0, and 10.0 mg/mL using methanol<bold id="strong-4136ed4c04fb4aec93540895bb03b1cf">.</bold> In each reaction tube, 500 μL of the test sample was combined with 500 μL of the probe solution and 500 μL of the hydroxyl radical generation mixture. The tubes were incubated at 37°C for 30 minutes. After incubation, the absorbance was recorded at 517 nm using a spectrophotometer.<xref id="xref-dc06e26d95484647b72f443832631bdf" rid="R264517132984254" ref-type="bibr">20</xref> The percentage inhibition of hydroxyl radical generation was assessed using the formula: </p>
          <p id="paragraph-b7523f52d3f84a69ac278ce6db40b011">% Inhibition = [(Absorbance of Control − Absorbance of Sample) / Absorbance of Control] × 100.</p>
          <p id="paragraph-c27da9b9412e4affa51cdb369e505381"> A standard curve was plotted to assess the antioxidant activity of the test samples, and IC50 values were determined as needed.</p>
        </sec>
        <sec>
          <title id="t-ec76310e2a05">2.7.3 <bold id="strong-aa79772f004e40e5b7f7b32c11ac42bc">Nitric oxide radical scavenging assay</bold></title>
          <p id="paragraph-c3ae7537f0c44e33b967348c6f345cf6">The nitric oxide scavenging antioxidant assay was conducted with the following specifications. A 10 mM sodium nitroprusside solution was prepared by dissolving sodium nitroprusside in phosphate-buffered saline (PBS) at pH 7.4. <xref id="x-4b35ed56ffd3" rid="R264517132984291" ref-type="bibr">21</xref> <bold id="strong-2452961fe4e44022b9f03bbadd0bc794"><sup id="superscript-0e7071c4697b44ad827e89e232248503"> </sup></bold>This solution was exposed to light to generate nitric oxide radicals. Test substances were diluted in PBS to various concentrations (e.g., 0.1, 0.5, 1.0, 5.0, and 10.0 mg/mL) and combined with an equal volume of the sodium nitroprusside solution. The mixtures were incubated at room temperature for 2 hours and 30 minutes. Following incubation, 500 µL of each reaction mixture was combined with 500 µL of Griess reagent, consisting of 1% sulfanilamide and 0.1% naphthyl ethylenediamine dihydrochloride in 2% phosphoric acid. The reaction was allowed to proceed for 10 minutes at room temperature, forming a pink-colored azo dye. Absorbance was recorded at 540 nm using a spectrophotometer. <xref id="x-d5370e697426" rid="R264517132984295" ref-type="bibr">22</xref> The percentage inhibition of nitric oxide formation was calculated using the formula:</p>
          <p id="paragraph-c48cafd894084903a337e5d2e5ff0b34"> Percentage inhibition = [(A_control − A_sample) / A_control] × 100.</p>
        </sec>
        <sec>
          <title id="t-81bd17472e0f">2.7.4 <bold id="strong-a8de9285575144cabd2ebbce011c4aee">Ferric reducing antioxidant power) assay </bold></title>
          <p id="paragraph-86195508e2d7464cb26bd164ad256424">The Ferric Reducing Antioxidant Power (FRAP) assay was conducted to evaluate the antioxidant capacity of samples by measuring their capacity to reduce ferric ions. A 300 mM acetate buffer was made by dissolving 3.1 g of sodium acetate trihydrate in 900 mL of distilled water, adding 16 mL of glacial acetic acid, and adjusting the volume to 1 litre<bold id="strong-afcd183390b04d01b2a9d9d09b5040c3">.</bold> A 10 mM TPTZ solution was made by dissolving TPTZ in 40 mM HCl, and a 20 mM ferric chloride solution was prepared by dissolving ferric chloride in distilled water. The FRAP working reagent was freshly prepared by mixing the acetate buffer, TPTZ solution, and ferric chloride solution in a 10:1:1 ratio. <xref id="x-b4a82b17828f" rid="R264517132984298" ref-type="bibr">23</xref> Standard solutions of Trolox were prepared with concentrations ranging from 3.90 µg/mL to 500 µg/mL. The assay was carried out by pre-warming the FRAP working solution to 37°C and adding 300 µL of each standard or sample solution to a 96-well microplate, followed by 2700 µL of FRAP reagent. The plate was incubated at 37°C for 30 minutes in the dark, after which the absorbance of the ferrous tripyridyltrazine complex was measured at 593 nm using a spectrophotometer. Absorbance values were plotted against standard concentrations to generate a standard curve, and the antioxidant capacity of the samples was assessed as Trolox Equivalent Antioxidant Capacity (TEAC)</p>
        </sec>
        <sec>
          <title id="t-6209d4ed40e1">2.7.5 <bold id="strong-0b69ed6b8d8e4493a8b2289f8f6e12ff">Phosphomolybdenum</bold><bold id="strong-51e9b1eb5a1e40d294410f645f5c5110"> assay for Total Antioxidant Capacity</bold></title>
          <p id="paragraph-adbad1a02f72450981403505a9691818">The phosphomolybdenum assay was employed to quantify antioxidant activity by measuring the reduction of molybdate (Mo (VI)) to molybdenum blue (Mo (V)) under acidic conditions. <xref id="x-ed1ed5bbd44a" rid="R264517132984299" ref-type="bibr">24</xref><bold id="strong-4c681ebc69b949d8b6ae2afa50e27df5"> </bold>Sulfuric acid, ammonium molybdate, sodium phosphate, and ascorbic acid were utilized. A standard solution of ascorbic acid (1 mg/mL) was prepared and serially diluted to 500, 250, 125, 62.5, 31.25, and 15.62 µg/mL. Sample solutions were dissolved in ethyl acetate or acetone to a concentration of 1 mg/mL and further diluted as necessary. The reagent solution consisted of 0.6 M sulfuric acid, 28 mM sodium phosphate, and 4 mM ammonium molybdate. For the assay, 300 µL of each sample solution was mixed with 1 mL of the reagent solution, incubated at 95°C for 90 minutes, then cooled to room temperature. Absorbance was measured at 695 nm. A blank containing the reagent solution and solvent was used to zero the spectrophotometer and standard curve of ascorbic acid was utilized to determine the antioxidant capacity. <xref id="x-a5484f4a0a6d" rid="R264517132984301" ref-type="bibr">25</xref> </p>
        </sec>
      </sec>
      <sec>
        <title id="t-07eb6e5d8459">2.8 <bold id="strong-b16fb3cb2e4544898ab3a17b17dcec3a">Statistical analysis </bold></title>
        <p id="paragraph-0f960b0e5aac459ca53d644dd0f49403">All experiments were conducted in triplicate to ensure reliability, with the mean and standard deviation of the data calculated to quantify variability. One-way ANOVA was applied to determine whether the choice of solvent significantly affected the outcomes of the antioxidant assays. Statistical analyses, including these computations and the generation of relevant plots, were performed using Microsoft Excel, ensuring comprehensive data evaluation and interpretation.</p>
      </sec>
    </sec>
    <sec>
      <title id="title-e31bf131517d4b7f923113372c96c3eb">3 Results</title>
      <sec>
        <title id="t-cf0783d8f340">3.1 <bold id="strong-0fb1b0dcd7ac4b06921a6587868f8bc2">Isolation and Characterization of Thermophilic Bacteria: Morphology, Biochemistry, and Growth Conditions</bold></title>
        <p id="paragraph-b6d8b9839d844332a7fc8a7e51a5ca96">Two thermophilic bacterial strains, termed as TR1 and TR2, were isolated from water samples of the Tatapani hot spring according to their thermostability. These isolates formed smooth, white, slimy, moist, rod-shaped colonies with undulate margins. Gram staining revealed that both strains are Gram-positive, non-motile rods. Both strains, TR1 and TR2, exhibited positive results for endospore staining, confirming their ability to form endospores, which are indicative of their resilience and survival capabilities under harsh environmental conditions. The dimensions of strain TR1 range from 2 to 6 μm in length and less than 1 μm in diameter, while strain TR2 measures 3 to 6 μm in length and 0.5 to 0.8 μm in diameter. Both strains are obligate thermophiles, unable to grow below 50°C. Strain TR1 can grow at temperatures up to 85°C, with optimal growth observed at 60°C, while strain TR2 can grow at temperatures up to 95°C, with optimal growth at 65°C.Strain TR1 exhibits growth within a pH range of 5 to 9, with optimal growth at pH 7. Conversely, strain TR2 demonstrates a broader pH tolerance, growing within a range of pH 3 to pH 12, with optimal growth at pH 6. Both strains can tolerate NaCl concentrations up to 0.5%. Strain TR1 shows optimal growth at 0.1% NaCl, whereas strain TR2 experiences inhibited growth at 0.2% NaCl. Growth of strain TR1 declines at 0.3% NaCl concentration. The results of various morphological and biochemical tests performed on the strains are detailed in <xref rid="table-wrap-7219e39c979341f99b3e89445f8fba5e" ref-type="table">Table 1</xref>, <xref rid="table-wrap-e30f130575e047eaab4b83272e0936a1" ref-type="table">Table 2</xref>. These tests include assessments of carbohydrate fermentation, enzyme activity, and other metabolic capabilities, providing a comprehensive profile of the biochemical and physiological characteristics of TR1 and TR2.</p>
        <table-wrap id="table-wrap-7219e39c979341f99b3e89445f8fba5e" orientation="portrait">
          <label>Table 1</label>
          <caption id="caption-5f687f384ae94a2c909cc3f8011222ab">
            <title id="title-d5723b99bffe4b8eac9209d908d299b9">
              <bold id="strong-3d2b0e108b3348199e5e65ded53ce61b">Morphological and Cultural Characteristics of Bacterial Strains</bold>
            </title>
          </caption>
          <table id="table-89035f5ec51743e9ac6ee11ff1e9035d" rules="rows">
            <colgroup>
              <col width="18.52"/>
              <col width="19.44"/>
              <col width="18.830000000000002"/>
              <col width="43.21000000000001"/>
            </colgroup>
            <tbody id="table-section-ef8a37d7df3e4bc3b4f7973f102db0a7">
              <tr id="table-row-3bb6970a91724d69a08772e73028ba91">
                <td id="table-cell-70768d23dcab47faa09c1350721656a7" align="left">
                  <p id="paragraph-0a1c3fba2b834f70b00d221d571a46a2">
                    <bold id="strong-b3a9142c24e94cf4bc178dcb85a37741">Morphological characteristic</bold>
                  </p>
                </td>
                <td id="table-cell-a403660df3cd46ee8ef8754ad7be25d2" align="left">
                  <p id="paragraph-3f358d03317748dd85a440b9d13e0d9a"><bold id="strong-6edb55be211b43b9997c119ab73d180e"><italic id="e-9ced19442c97">Bacillus </italic></bold><italic id="e-9ced19442c97-1b726b12-215f-4f96-8ec0-2901bfbfb201"><bold id="strong-4b9dc6a096ea4449b4f508d574616461">nakamurai</bold></italic> <bold id="strong-e4ec7baa8de3466abb23470d0009b92a">(TR1)</bold></p>
                </td>
                <td id="table-cell-602b78f617494e8db5cd55962606a69f" align="left">
                  <p id="paragraph-e96b40487b1d475a834338a0444c34ea"><bold id="strong-bd043b607b3b49f78bc96956f835e483"><italic id="e-c6dccf3f9d61">Bacillus licheniformis</italic></bold> <bold id="strong-1d5628416fa94fa4a7cb8bab1198afb4">(TR2)</bold></p>
                </td>
                <td id="table-cell-31704a1809d34212a61b505fbd48fb0f" align="left">
                  <p id="paragraph-534faf337a2c42c48ae17db50f0eb2b2">
                    <bold id="strong-5e6a6374fa9e4f35930a54fb777cca19">Interpretation</bold>
                  </p>
                </td>
              </tr>
              <tr id="table-row-a606450aeeba4a59bfccfd00d5228c28">
                <td id="table-cell-5c4859a09e6841e2858a22bdb24e0f6f" align="left">
                  <p id="paragraph-ca0057fb7ff5433e9296443bca6eede0"> Gram Staining</p>
                </td>
                <td id="table-cell-c082faee2687449ea1309b04b48f1019" align="left">
                  <p id="paragraph-c12f1c379f0745a893c88d6fa45fd35f"> Positive</p>
                </td>
                <td id="table-cell-37577bd0405147e5b0b444e3edb9fae1" align="left">
                  <p id="paragraph-8b514236a1c14e2c8992a1fec5843899"> Positive</p>
                </td>
                <td id="table-cell-68478fc17b384876aa376f603a3706e6" align="left">
                  <p id="paragraph-eeb0555a14bb4c2182429c6e771912c7"> Both are Gram-positive bacteria (retain crystal violet stain).</p>
                </td>
              </tr>
              <tr id="table-row-fdf8f41e33fe42498ee887a4e6dd4a68">
                <td id="table-cell-b3c96aa5ca094c44a86e02b2c36a538d" align="left">
                  <p id="paragraph-20c79903d4804e6dafd2e28b04038e5b"> Cell Shape</p>
                </td>
                <td id="table-cell-88f0763611cd40a796989f74a0e3a32b" align="left">
                  <p id="paragraph-b0d81c85a11f479681af63e1088954e7"> Rod-shaped</p>
                </td>
                <td id="table-cell-7d54e9680a2c443a9abbeb73ad30c417" align="left">
                  <p id="paragraph-6f2a3e2e1b4a4a56920a7cf52c0ec6e0"> Rod-shaped</p>
                </td>
                <td id="table-cell-cd2224a809a8497c83ee76efc3d23c12" align="left">
                  <p id="paragraph-7c9d44bf2d3043be8d095e85310bb0b7"> Both are rod-shaped (bacilli).</p>
                </td>
              </tr>
              <tr id="table-row-7b00121d19b745bf97157276747cca2a">
                <td id="table-cell-ac8877f371914dc69fb60bff1d58b073" align="left">
                  <p id="paragraph-c92c264398f345e1a3fbbd0d2c25b7a9"> Cell Arrangement</p>
                </td>
                <td id="table-cell-d96323b3fff54b8389312417dc537939" align="left">
                  <p id="paragraph-4919177d16f74bdf999a5c7ad4c01d55"> Single or in short chains</p>
                </td>
                <td id="table-cell-0b3455e86f3c4357964de1a9a48c99ec" align="left">
                  <p id="paragraph-82c0660b9d9845108d1f1b079bdef1e3"> Single or in short chains</p>
                </td>
                <td id="table-cell-5d3dd261906140c0ae2ac4601b064e49" align="left">
                  <p id="paragraph-7ceee159653f457e830b61af6c2011d5"> Both cells are arranged singly or in short chains.</p>
                </td>
              </tr>
              <tr id="table-row-13125e2e6a084c398a98a63fdc6d0f87">
                <td id="table-cell-e1b884888548466a9d7a5b552a7c0e3d" align="left">
                  <p id="paragraph-a5955f3f28874e3f860ba366fd4549c6"> Endospore Formation</p>
                </td>
                <td id="table-cell-72bc49dd09564a98b5683891c11bd41f" align="left">
                  <p id="paragraph-c1724a0959304c419fbbbedf853cf1ed"> Positive</p>
                </td>
                <td id="table-cell-133b9b82d89a4d8bb867fbc9684c7915" align="left">
                  <p id="paragraph-563d8100e0304215bc0c92b372e77194"> Positive</p>
                </td>
                <td id="table-cell-7caf8ea8afcc4758a2dd1955cb58ba67" align="left">
                  <p id="paragraph-158e04a3c85241dcbf5034437148bc72"> Both form endospores.</p>
                </td>
              </tr>
              <tr id="table-row-45f8ca6bca1e4cea9417c73a1dc48b8b">
                <td id="table-cell-1f4bd61062c34a8da2a9dbc5e31ba24d" align="left">
                  <p id="paragraph-835bd394fe564269962e0cef1ec69fe9"> Motility</p>
                </td>
                <td id="table-cell-62ed6a6eceb84c7fb8fe0f4f74d0ba3c" align="left">
                  <p id="paragraph-9148860b01194fd0a93e4948f8003d5b"> Positive</p>
                </td>
                <td id="table-cell-180aea700f9a47298240f6630904fb29" align="left">
                  <p id="paragraph-50359281c7ca42e2ae75fc4b62c553a4"> Positive</p>
                </td>
                <td id="table-cell-10730e9bf8d24cd292ddb08b15b3a617" align="left">
                  <p id="paragraph-a080a84daf4649699e93e34cb70c07b4"> Both are motile.</p>
                </td>
              </tr>
              <tr id="table-row-f76c8faa4ad44145a009b8777be365c1">
                <td id="table-cell-6f029c8fc10745feb0e6afeb58479d82" align="left">
                  <p id="paragraph-2640a1ad76a74c6e811f6c094a82a4af"> Colony Morphology</p>
                </td>
                <td id="table-cell-2ce7c427e77d4ec8abb86d87969cd183" align="left">
                  <p id="paragraph-9156f78f74f746afbaaa408806e11a9f"> Circular, flat, with irregular edges</p>
                </td>
                <td id="table-cell-cde543bc953a405dbd9427ce5ec5ab8e" align="left">
                  <p id="paragraph-1b4926639d754428980b13a574a5b090"> Circular, flat, rough, with irregular edges</p>
                </td>
                <td id="table-cell-7b110c753b03453a9bb06420a9861051" align="left">
                  <p id="paragraph-e45e5eaa46c04895956dec129c1e80bf"> Both have circular, flat colonies with irregular edges.</p>
                </td>
              </tr>
              <tr id="table-row-5e4f3a95743c488a87cd1305bf836613">
                <td id="table-cell-c4025e12fa254c83b22c7d1b1769984b" align="left">
                  <p id="paragraph-9243dbadcd124eabaecd481becf34d9a"> Colony Colour</p>
                </td>
                <td id="table-cell-95df9f8e208d472fadd0afd746c092ac" align="left">
                  <p id="paragraph-969382f6f09843c3944b3e68a3dd26f8"> White to cream-colored</p>
                </td>
                <td id="table-cell-ba9829fe8c2e41649476bd5992870fd4" align="left">
                  <p id="paragraph-3cd132475b1946b19c85858945247ac8"> White to cream-colored</p>
                </td>
                <td id="table-cell-e37caad8e7c848b4b1979ee46647787c" align="left">
                  <p id="paragraph-1575652086794a4695d61eee360ee778"> Both have white to cream-colored colonies.</p>
                </td>
              </tr>
              <tr id="table-row-8bbec17985364459a4550a583f68f5af">
                <td id="table-cell-be1e0dd27b5a4e87bd4d9e794fe81d2c" align="left">
                  <p id="paragraph-a660e26276c14e7cb429b6c7fed12ac8"> Optimum Temperature for Growth</p>
                </td>
                <td id="table-cell-22a139e339e6463f84590a9b72c0a38a" align="left">
                  <p id="paragraph-e9fe003b147e4cdb9a371daf9d77a543"> 50-60°C</p>
                </td>
                <td id="table-cell-06830e9d417145d4bb3da520dca04462" align="left">
                  <p id="paragraph-5e0fe2dc2eb247bd8add657daef393ea"> 50-60°C</p>
                </td>
                <td id="table-cell-6b6861230d5c43b29c3ca7f35a8aa4f0" align="left">
                  <p id="paragraph-0af6c960a0624aeca6178098863b6a52"> Both are thermophiles, growing optimally at 50-60°C.</p>
                </td>
              </tr>
              <tr id="table-row-61ab3fb5280544669e0011eca731b1a5">
                <td id="table-cell-6c2d9676db6141199654388cb031415e" align="left">
                  <p id="paragraph-eac362a705f244c0b6a8b5c61a3e8ceb"> Colony Elevation</p>
                </td>
                <td id="table-cell-d67a1e120c8b45f4b43a14f122fa2483" align="left">
                  <p id="paragraph-02c42df80880472382afd258e73ebec2"> Flat to slightly raised</p>
                </td>
                <td id="table-cell-a6b547db443449949a221d624b14e377" align="left">
                  <p id="paragraph-ca542aea9e4142ecb6e0649096b68a43"> Flat to slightly raised</p>
                </td>
                <td id="table-cell-0d96f9633c5e4ff0a0af5c48a18c26dc" align="left">
                  <p id="paragraph-a76b374d3ec54f26a2770350d5fc72ba"> Both have flat to slightly raised colonies.</p>
                </td>
              </tr>
              <tr id="table-row-e8476dc5e37042b8b237133d86c1a5d3">
                <td id="table-cell-bb2ce96ea03b4d91843120d456e9c2be" align="left">
                  <p id="paragraph-2713e75ccbcf419eaa7fbff93f404b40"> Colony Surface</p>
                </td>
                <td id="table-cell-24ceccb58a654a63a61199b1e5f913dc" align="left">
                  <p id="paragraph-b6cda7803fa549c3859eb23ee19de3f0"> Smooth to rough</p>
                </td>
                <td id="table-cell-b50dfc7a5b5a474fbdef2d57c4cf48d3" align="left">
                  <p id="paragraph-55b25d865d594d47a92e4b473e9cfc00"> Rough</p>
                </td>
                <td id="table-cell-fadf8a7040ee495db986c45a95e91e09" align="left">
                  <p id="paragraph-348001eedd1e4198acadf24cd7509c1b"> <italic id="e-a423d04c1849">Bacillus nakamurai</italic> has smooth to rough colonies; <italic id="e-c9e1b90bb176">Bacillus licheniformis</italic> has rough colonies.</p>
                </td>
              </tr>
              <tr id="table-row-331ff46c120e4a7a9c6894804b534b86">
                <td id="table-cell-6804b077cf9d46a0873cf6b72dd57107" align="left">
                  <p id="paragraph-efec8a21211c4aefaee4209fe579753f"> Colony Margin</p>
                </td>
                <td id="table-cell-e351f0a7e8e64b2ea3f87c3aa3328f59" align="left">
                  <p id="paragraph-bfce75c9dcd34c78aded2496098aa42d"> Undulate</p>
                </td>
                <td id="table-cell-8e58108e5e0842888d1651f76fe06d4d" align="left">
                  <p id="paragraph-516a408a2a01409499ec96d50cb79f6f"> Undulate</p>
                </td>
                <td id="table-cell-bb07389d4876454dafc31e3f9615d7e7" align="left">
                  <p id="paragraph-e2bb83e80fa34540906fba4ad8a5f9f0"> Both have undulate colony margins.</p>
                </td>
              </tr>
              <tr id="table-row-117065c5b5804f43a828d20d33fc99bb">
                <td id="table-cell-6c93f3d484a341528e03de04a79bd0b8" align="left">
                  <p id="paragraph-b87826aa479a427a9a2b52360613a537"> Spore Position</p>
                </td>
                <td id="table-cell-e5e6c5b0e27d4b44af00f85f94272442" align="left">
                  <p id="paragraph-7ba7ec44c3a64ea4a716f08adeb961ce"> Central to subterminal</p>
                </td>
                <td id="table-cell-9001ab387aed4c3cbfc4985c70ad3c0f" align="left">
                  <p id="paragraph-8cb6cc3b9fb84fb8b334b7466702218b"> Central to subterminal</p>
                </td>
                <td id="table-cell-ba9fc2da0de04d0d874fe4f94bd33518" align="left">
                  <p id="paragraph-b6e3b7e01ffd479b95b3397174bcb43e"> Both have centrally to subterminal positioned spores.</p>
                </td>
              </tr>
              <tr id="table-row-5af26d4d4e4e4fada7fb6dfa840d21fc">
                <td id="table-cell-49ad3988353d4c9bb3f17f1be55d8c27" align="left">
                  <p id="paragraph-b929f6159c5047d88938ea086fdc1736"> Spore Shape</p>
                </td>
                <td id="table-cell-1382d0a9ebbe4928a125563294fd2dd0" align="left">
                  <p id="paragraph-f52bf39a5f6749bca1cc7c8f2cbd9dd8"> Ellipsoidal</p>
                </td>
                <td id="table-cell-038664dbe83b411e8d317749bad1c02f" align="left">
                  <p id="paragraph-492c067e0b3843668b0eb4dc7b0ebc9d"> Ellipsoidal</p>
                </td>
                <td id="table-cell-102c641adc2f469f89bb779d2ebd1e64" align="left">
                  <p id="paragraph-39bf5e175952403bbafba38469083b27"> Both have ellipsoidal-shaped spores.</p>
                </td>
              </tr>
              <tr id="table-row-4cd52cb6782a4cc6bb1a4c4bf2773092">
                <td id="table-cell-3c67d4bd06954f20ad8b872382c7989d" align="left">
                  <p id="paragraph-8b8a85147b6348d0af8c8bad82b877c7"> Growth in Anaerobic Conditions</p>
                </td>
                <td id="table-cell-c61c6e63f91a40e789be38fe7b2249a5" align="left">
                  <p id="paragraph-66cd8b4ed4064b84bc5993214fa8e992"> Facultative anaerobe</p>
                </td>
                <td id="table-cell-93b1b9fca59f4d5c8eb5dd389a0ba787" align="left">
                  <p id="paragraph-04d4e99e4b5e406cb93610d3676fba7b"> Facultative anaerobe</p>
                </td>
                <td id="table-cell-d145bd1498c248309db9e9b91ce11087" align="left">
                  <p id="paragraph-dcf0347cb59f47c79c69d074f696d953"> Both can grow in the absence of oxygen, indicating facultative anaerobic capabilities.</p>
                </td>
              </tr>
              <tr id="table-row-21dfd38f2623414ab4541de6838b6fbf">
                <td id="table-cell-29d97ba0852b4d6fb0afcebe16fc9ab2" align="left">
                  <p id="paragraph-0e631fab10d0429f9ff0cffb106f5dc9"> Morphology in Broth Culture</p>
                </td>
                <td id="table-cell-4c7a02deeda54abb84df9746034d6742" align="left">
                  <p id="paragraph-050d3ff61c4e4b828ac63430427e11ed"> Uniform turbidity</p>
                </td>
                <td id="table-cell-8349c408cbd4491b99e89ff526e4fbaa" align="left">
                  <p id="paragraph-cbcf36593fa44629a230b13dadd27f38"> Uniform turbidity</p>
                </td>
                <td id="table-cell-e99fab7659774ea4a6e9d7040a0ae854" align="left">
                  <p id="paragraph-b70ee2ed0e4b40cf8e72b9ad4dcc7d40"> Both show uniform turbidity in broth culture.</p>
                </td>
              </tr>
              <tr id="table-row-18c504276456497f8d62b834eb8a0ec9">
                <td id="table-cell-82c8a5e3bae346108cf50390d89f59e6" align="left">
                  <p id="paragraph-aec1f27a9f4c49de939b02bbf4fcece6"> Oxygen Requirement</p>
                </td>
                <td id="table-cell-a1b933fc72424549a53e17db171f9157" align="left">
                  <p id="paragraph-7adb681b28c84801b9e755b62e751b4d"> Facultative anaerobe</p>
                </td>
                <td id="table-cell-19842d8ab8bd408caaa2ba979466244a" align="left">
                  <p id="paragraph-092a8f5912534d3f8c6410fd8104aba7"> Facultative anaerobe</p>
                </td>
                <td id="table-cell-5c48dc0ae95a46878f7d8756c058ad10" align="left">
                  <p id="paragraph-db1b6ef93d1b4ee6b93c9c8d2545c729"> Both can grow in both the presence and absence of oxygen.</p>
                </td>
              </tr>
            </tbody>
          </table>
        </table-wrap>
        <table-wrap id="table-wrap-e30f130575e047eaab4b83272e0936a1" orientation="portrait">
          <label>Table 2</label>
          <caption id="caption-18087cab368f44938e17ee13774b6c43">
            <title id="title-1fd9ac2e68804f728116e8a60b4b0436">
              <bold id="strong-131381947b1d4f08b9f480b8956d3e32">Biochemical </bold>
              <bold id="strong-05f149446e0c4570b500f90a38af9627">Characterisation</bold>
              <bold id="strong-e4509dd7cfba437f8cf1648c824a8fa7"> of Isolated Bacterial Strains</bold>
            </title>
          </caption>
          <table id="table-eb8489b6f79041c3a3b70e7e04022290" rules="rows">
            <colgroup>
              <col width="17.59"/>
              <col width="14.81"/>
              <col width="15.75"/>
              <col width="51.85000000000001"/>
            </colgroup>
            <tbody id="table-section-52b529cba4744b8b9caab09c53aee86b">
              <tr id="table-row-a050901739a94b0a8bc765cee807f82e">
                <td id="table-cell-83764975fecf4d02b43d5c8ac63f5149" align="left">
                  <p id="paragraph-d4ddb91eca1d4c30b55d163512d449db">
                    <bold id="strong-f22fc926322641ed8a4765003c41dba0">Biochemical Test</bold>
                  </p>
                </td>
                <td id="table-cell-aa3b4a46cdf94b6fa4abe7026e44aabf" align="left">
                  <p id="paragraph-526af8a06d0d412681e3577619b96078">
                    <bold id="strong-03c41ab8ede74858b366365c8c9acc49">
                      <italic id="e-0803b1b9b1f0">Bacillus </italic>
                    </bold>
                    <italic id="e-0803b1b9b1f0-fea7865b-6fce-4a60-9fb4-8b2e56f5faaa">
                      <bold id="strong-587e107141c1448ebc7eb9a31c95ab80">nakamurai</bold>
                    </italic>
                    <bold id="strong-e554d52190114359b2f1d10615324ad7"> (TR1)</bold>
                  </p>
                </td>
                <td id="table-cell-f598b0c7aa0c47329dc56b2a10853664" align="left">
                  <p id="paragraph-1cdfbc53f8c04c40b6d711fbb4897dce">
                    <bold id="strong-4822768390ea474abdeec0d59c24f6f6"><italic id="e-053043570c27">Bacillus licheniformis</italic> </bold>
                    <bold id="strong-04c1319b2acb4f11a3ecc7d69e458f55">(TR2)</bold>
                  </p>
                </td>
                <td id="table-cell-1e8c9449d3be4345a27bfee117f39e54" align="left">
                  <p id="paragraph-a2fc360660ba4466b80e9a5da49e63e1">
                    <bold id="strong-4fd59d86a1f24e5aa03b18acec4fcf05">Interpretation</bold>
                  </p>
                </td>
              </tr>
              <tr id="table-row-c178622d13b8455683c3c35a62193415">
                <td id="table-cell-d480ed3065b64316abec9cd44ead1222" align="left">
                  <p id="paragraph-6e1a162230b245bd838230d5b1dbdb38"> Urease Test</p>
                </td>
                <td id="table-cell-efc56c2d046b4f9d91bff64a0138174d" align="left">
                  <p id="paragraph-de352b2d67284cc891181bc2eb5d1938"> Negative</p>
                </td>
                <td id="table-cell-e5630dacc2b646b2b103c1ef0853eae5" align="left">
                  <p id="paragraph-95d9ddae80a7407ca5e002201476e67e"> Positive</p>
                </td>
                <td id="table-cell-1b70faa857ea409c861738c370744db4" align="left">
                  <p id="paragraph-7a8075cc52a440739854638834543509"> <italic id="e-1fb7400989cc">Bacillus nakamurai</italic><bold id="strong-3edfbd8bbe454e2bb225db508975f7e6"> </bold>does not produce urease; <italic id="e-95967f98e65d">Bacillus licheniformis</italic> does.</p>
                </td>
              </tr>
              <tr id="table-row-7d0c154837cf4e60a3f58cff8eba2ef1">
                <td id="table-cell-791dc974d96f4a46802cf8965db7f4c0" align="left">
                  <p id="paragraph-3c7d30a0bde7482bb31b22f3b38d29cf"> Catalase Test</p>
                </td>
                <td id="table-cell-71f3e6e796df4810a53c5bac1b6f53c3" align="left">
                  <p id="paragraph-7f8c2864bd694adfafce62022ecd8f34"> Positive</p>
                </td>
                <td id="table-cell-94bceb734d46443f892c2d700ea40c67" align="left">
                  <p id="paragraph-f7cf7873b42445859a9146e544370d16"> Positive</p>
                </td>
                <td id="table-cell-d18dcb56cc1e439ebb5db38f17f5322b" align="left">
                  <p id="paragraph-4283627c1d384c8198bdeaeb39136b30"> Both produce catalase enzyme, which breaks down hydrogen peroxide.</p>
                </td>
              </tr>
              <tr id="table-row-f238470ae3c74afdbfda2db0c57c9a47">
                <td id="table-cell-bc16167093fe452f93dfb80cb28f6f89" align="left">
                  <p id="paragraph-a9be170bf1b7498eb3153264098a30a4"> Casein Hydrolysis Test</p>
                </td>
                <td id="table-cell-40abf97030944f7da3b8cea0cffa5329" align="left">
                  <p id="paragraph-eb6e27d39e984a98bc6b1910be57d2d2"> Positive</p>
                </td>
                <td id="table-cell-4d2500cead634fcb9405ec085b13a06f" align="left">
                  <p id="paragraph-fad438517904406a881f58ae7929cc80"> Negative</p>
                </td>
                <td id="table-cell-b82d2dc752eb47e7a9d703ef69a0be98" align="left">
                  <p id="paragraph-9b62695a4adc48acbaef6cd2bd98ee5d"> <italic id="e-bf9fa654da0f">Bacillus nakamurai</italic> hydrolyzes casein (produces clear zone around growth); <italic id="e-55de3541d2ba">Bacillus licheniformis</italic> does not.</p>
                </td>
              </tr>
              <tr id="table-row-cf76ee2384b949f6861f44f2be9cac07">
                <td id="table-cell-e22afcfa8d4542668ca7e0c48b8f18f4" align="left">
                  <p id="paragraph-959f6abbce9a476b8ae3329e0d13def2"> Citrate Utilization Test</p>
                </td>
                <td id="table-cell-8bf4bbb8c76346bd89e5a58e1772a1a5" align="left">
                  <p id="paragraph-3ea60706ff68407ca508fcde8f251257"> Positive</p>
                </td>
                <td id="table-cell-e80fad4f195f4c29822df91e9ba0d1c0" align="left">
                  <p id="paragraph-4786467f5a654053a6423c4776e29e71"> Positive</p>
                </td>
                <td id="table-cell-e267d4ca5d8b4b43bccdcf35368595e4" align="left">
                  <p id="paragraph-f9c8bf7e5e644cf7a9d5103d51736b30"> Both utilize citrate as the sole carbon source, turning the medium blue.</p>
                </td>
              </tr>
              <tr id="table-row-81ee8a3a051b4b459d16b519ecad7c1b">
                <td id="table-cell-196344dbd9be40b5be6ef609f8d8cb14" align="left">
                  <p id="paragraph-cd4423ec9157426f87f6cb8aad0e32e6"> Gelatin Hydrolysis Test</p>
                </td>
                <td id="table-cell-35979f606eb94c669396bb69d722e52b" align="left">
                  <p id="paragraph-c7c8afc75fc147e981b6cc7e5ac13f3f"> Positive</p>
                </td>
                <td id="table-cell-78ae3cdeff7d44739621c3579a2a8902" align="left">
                  <p id="paragraph-4e691ba8c47f4d4692e44cc7562ea967"> Negative</p>
                </td>
                <td id="table-cell-aa47b89b65f9467ba792d91fecffb446" align="left">
                  <p id="paragraph-c9371f552f494301af97c7d7389ebe15"> <italic id="e-7b79b07fdb04">Bacillus nakamurai</italic> hydrolyzes gelatin (medium becomes liquid); <italic id="e-4a9b488358a9">Bacillus licheniformis</italic> does not.</p>
                </td>
              </tr>
              <tr id="table-row-f1a8b1c219ee40a18b1250c04674e268">
                <td id="table-cell-453ea08b26d34669913cf0f84b6f1253" align="left">
                  <p id="paragraph-ac21019050ac40aea35e6e94366e2d49"> Triple Sugar Iron (TSI)</p>
                </td>
                <td id="table-cell-0d1717b8ed61417f8c866c4a3fc49c43" align="left">
                  <p id="paragraph-1a32e5d39099432088fc6bc72a3cb311"> A/A or K/A (H2S)</p>
                </td>
                <td id="table-cell-2cbab34a9ad84e0c85bc71cca0690ec0" align="left">
                  <p id="paragraph-f7b2582a67014b87af6f55a9ff0977df"> K/A</p>
                </td>
                <td id="table-cell-32e51bcb333d479692fddf5d610d446f" align="left">
                  <p id="paragraph-039f0e9d5826440b98f98cf5e11f6cfc"> <italic id="e-6a22e60b0a09">Bacillus nakamurai</italic>: Ferments glucose, may produce H<sub id="subscript-bdea7b3f84f3421f88c6425db766c507">2</sub>S; <italic id="e-8fd25bb6de67">Bacillus licheniformis</italic>: Ferments glucose, does not produce H<sub id="subscript-3bc62bf9f16b4d3997b7f42cbb34264f">2</sub>S</p>
                </td>
              </tr>
              <tr id="table-row-eea0ca58479e49d89b6cd90fd0aebdca">
                <td id="table-cell-9347c4519e28471faeefcaf438182a66" align="left">
                  <p id="paragraph-0f0bcf89fc1544678b1e85ce261f7cb4"> Methyl Red Test</p>
                </td>
                <td id="table-cell-36bfddbf6839400b8c1101b482713de4" align="left">
                  <p id="paragraph-0f2ccca9d7bc4d509d58a8c35bdce363"> Positive</p>
                </td>
                <td id="table-cell-a843bc7d16e9467fae90df57afb07c98" align="left">
                  <p id="paragraph-52be0c29d09a431f9155bb5245d5bc19"> Positive</p>
                </td>
                <td id="table-cell-b921851040a54329a0a38b403d3d5cff" align="left">
                  <p id="paragraph-e7f6736d0d404e9ba96f8b63b7c2ea37"> Both perform mixed acid fermentation (medium turns red)</p>
                </td>
              </tr>
              <tr id="table-row-9cee25b9a6fd4da69820f0deda44718c">
                <td id="table-cell-fe1d41d58a1541c594104acbb5db6114" align="left">
                  <p id="paragraph-255cd34a31454748aef8f8bf7d2f2bac"> Voges-Proskauer Test</p>
                </td>
                <td id="table-cell-7ca04eeeba6b4211af09edd8bec057e3" align="left">
                  <p id="paragraph-864ead98bca9495bbb98a33e26b41c43"> Positive</p>
                </td>
                <td id="table-cell-9b6baa44f2644c568bff3fc82db875b6" align="left">
                  <p id="paragraph-3672e76a47f64526a0a80e6ef5340ed2"> Positive</p>
                </td>
                <td id="table-cell-97cc1d4d8dc043c88cf2c645531660c6" align="left">
                  <p id="paragraph-cd19beac47a141f6b607d3e3779ad533"> Both produce acetoin</p>
                </td>
              </tr>
              <tr id="table-row-07e6171d173b493892490a7efdce9f11">
                <td id="table-cell-ee22a065f6d8401596b56789c3ed24da" align="left">
                  <p id="paragraph-3900d07b1e0843fcbe3104835524dd02"> Starch Hydrolysis</p>
                </td>
                <td id="table-cell-811489fd4f434b25a70b01b85f4d2f7a" align="left">
                  <p id="paragraph-fc46a935dbbd481c96ae4289aee0c893"> Positive</p>
                </td>
                <td id="table-cell-51f73c9254e94fef802ca70b295d47d8" align="left">
                  <p id="paragraph-65d13856114b41f898c16eb952ad2301"> Negative</p>
                </td>
                <td id="table-cell-485dadb2340749bc8a2d38f90945c364" align="left">
                  <p id="paragraph-1a5670c6ad4d490faf3160061df91ec0"> <italic id="e-59c122c53237">Bacillus nakamurai</italic> hydrolyze starch (clear zone around growth on starch agar), while <italic id="e-49feca16150f">Bacillus licheniformis</italic> does not.</p>
                </td>
              </tr>
              <tr id="table-row-7181cadd14e345bb85c05f5f47dd4e74">
                <td id="table-cell-caa0928bd726425bb5c115364f54d0c0" align="left">
                  <p id="paragraph-74b0794428e3426680c86ddabe1f74da"> Indole Test</p>
                </td>
                <td id="table-cell-6bbf6d3f827643eba232f7b09ff12409" align="left">
                  <p id="paragraph-31f2f75e4220438da9df123ea8f4c012"> Positive</p>
                </td>
                <td id="table-cell-0df7b6d627ff450ba15ee11a61adc9d4" align="left">
                  <p id="paragraph-4ad66930317e4654b307dcc502363797"> Positive</p>
                </td>
                <td id="table-cell-6bd434582d1941149ffd0238d7a592b0" align="left">
                  <p id="paragraph-8cb0899b85ef4d898056a80581400650"> Both produce indole (medium turns red or pink)</p>
                </td>
              </tr>
              <tr id="table-row-ce3b04ef86544313b8a3d234dff38057">
                <td id="table-cell-31c309b0baf04e37bc93e7d59ac02271" align="left">
                  <p id="paragraph-ee48916d80e3449d89767d15ebcc5a52"> Mannitol Salt Agar (MSA) Test</p>
                </td>
                <td id="table-cell-50ef4d4ab6f44eada26bf89b1d61fb5a" align="left">
                  <p id="paragraph-e22763f364e84701beb258fef73d99bc"> Negative</p>
                </td>
                <td id="table-cell-b8bb94a9f05746bea9e4d5ef76d529a0" align="left">
                  <p id="paragraph-7900ac971cf04e8396a63ef7b1a1f75d"> Positive</p>
                </td>
                <td id="table-cell-8479c8c7770e41eda0015389a58de71c" align="left">
                  <p id="paragraph-8bc66f5ca7ab46debf01ff48839f19f1"> <italic id="e-032fc8176f9a">Bacillus nakamurai</italic> do not ferment mannitol on MSA while <italic id="e-d9dbad748705">Bacillus licheniformis</italic> does</p>
                </td>
              </tr>
              <tr id="table-row-0684b0a9858f4db690c375834189c9a3">
                <td id="table-cell-09d087c41af9469da50f9655d2910c64" align="left">
                  <p id="paragraph-55b7205d136044b7b2f1aa0c81b2a9d0"> Xylose Fermentation Test</p>
                </td>
                <td id="table-cell-a01f23532e204ff6acaa6728994c3786" align="left">
                  <p id="paragraph-fdf90b29cb134d41913836243a63db94"> Positive</p>
                </td>
                <td id="table-cell-8523c226465d4be5892955fc64172d66" align="left">
                  <p id="paragraph-40fcb1247dcd4531a64cec5432ae4b9d"> Negative</p>
                </td>
                <td id="table-cell-d6f06927f6e24c0fbcd2b3a552721683" align="left">
                  <p id="paragraph-22002f57ff97447ab8846282818b3b92"> <italic id="e-7b777cfd8dc3">Bacillus nakamurai</italic> ferments xylose (medium turns yellow); <italic id="e-62f4412f34af">Bacillus licheniformis</italic> does not.</p>
                </td>
              </tr>
              <tr id="table-row-7645be244afb4518aad208b6ca6b0ce1">
                <td id="table-cell-94db3d21c222429ab081bb29702db916" align="left">
                  <p id="paragraph-2b6061bb14dd4f7bb39c8d84a5afa51d"> Malonate Utilization Test</p>
                </td>
                <td id="table-cell-0cc704b05a894d40a91f68f1954cf180" align="left">
                  <p id="paragraph-f5fcc3035eae46a58824f4b7e3d61c20"> Positive</p>
                </td>
                <td id="table-cell-845b7a346d5d4877b2c205a58c9af1f9" align="left">
                  <p id="paragraph-2f51a59ef63946688210b14be75f1bed"> Negative</p>
                </td>
                <td id="table-cell-ad7b290335e64fcc84b47403c4c39e2d" align="left">
                  <p id="paragraph-66f8e8d9580a4983a3596f3967117580"> <italic id="e-d87fcbaf4947">Bacillus nakamurai</italic> utilizes malonate (medium turns blue); <italic id="e-0fe103d3763f">Bacillus licheniformis</italic> does not.</p>
                </td>
              </tr>
              <tr id="table-row-7c6f305f1ce44358b77ef4774cd67e0c">
                <td id="table-cell-44d4a986c6fb4739b429160348b4b73b" align="left">
                  <p id="paragraph-480d7213cc234d8cbdc749e6f0770642"> Lactose Fermentation Test</p>
                </td>
                <td id="table-cell-f3f0472df7f748a7943f9e7822b0074c" align="left">
                  <p id="paragraph-4e2d52ef704c4322988f3bc42a5bf166"> Negative</p>
                </td>
                <td id="table-cell-b8074b943c91455e81ee92cdca5f60df" align="left">
                  <p id="paragraph-95926a07d2014c1a924575a5df8fa3a4"> Positive</p>
                </td>
                <td id="table-cell-9035097489904082b02c6e2c7ae051e0" align="left">
                  <p id="paragraph-48741165f997477da7dbc2fec4748981"> <italic id="e-853b9618d8bb">Bacillus nakamurai</italic> does not ferment lactose; <italic id="e-4333da392eae">Bacillus licheniformis</italic> does.</p>
                </td>
              </tr>
              <tr id="table-row-ef56ede48de7416a8c4c3e81267555e4">
                <td id="table-cell-811018977bfd423a9f64d6e1ab151567" align="left">
                  <p id="paragraph-0c53ad45abf6495698f05b992b5d55d1"> Arabinose Fermentation Test</p>
                </td>
                <td id="table-cell-dae0972990d645e3bf26dd177dbaf99e" align="left">
                  <p id="paragraph-0a3ae8d734c940b791c546abae004f00"> Positive</p>
                </td>
                <td id="table-cell-36c87fef6c954be1918dbb68f9ed9413" align="left">
                  <p id="paragraph-0279b3ede0604a27a8875dcf4042f116"> Negative</p>
                </td>
                <td id="table-cell-5d654ea716be4a0891c5ede5e1d1c625" align="left">
                  <p id="paragraph-6ae558eeacea4376bace6cc4f5960bb1"> <italic id="e-7f24a94cd645">Bacillus nakamurai</italic> ferments arabinose (medium turns yellow); <italic id="e-acc0e1cf94c7">Bacillus licheniformis</italic> does not</p>
                </td>
              </tr>
              <tr id="table-row-78e7504a28ad482c9fdf4e3d42a00970">
                <td id="table-cell-2ab942a9c9ec4ea88cead91af9c4c9f2" align="left">
                  <p id="paragraph-9c80f31b09434a44a0dcb043704cd1a7"> Rhamnose Fermentation Test</p>
                </td>
                <td id="table-cell-b3ded22cfa934564a8f116bf6462f180" align="left">
                  <p id="paragraph-f3ef3078463443388d2492b4da701955"> Negative</p>
                </td>
                <td id="table-cell-14c342de7c96488d8cf8914d0def3a6a" align="left">
                  <p id="paragraph-dce0e9deb63b45dbb520164823542fda"> Positive</p>
                </td>
                <td id="table-cell-91b035939ad84898bd457e62ad9cdb1c" align="left">
                  <p id="paragraph-1322dd12da6d4a21823dc4f365ce3e8d"> <italic id="e-6608256c4283">Bacillus nakamurai</italic> does not ferment rhamnose; <italic id="e-96965defd9a1">Bacillus licheniformis</italic> does.</p>
                </td>
              </tr>
              <tr id="table-row-38875c68f0b74b3daaeaa0a3daf50607">
                <td id="table-cell-ed1374b5d0bb4c0b84ae0c7f921f852d" align="left">
                  <p id="paragraph-42ad14bb39804316a90d4be317f3400d"> Sorbitol Fermentation Test</p>
                </td>
                <td id="table-cell-7776fd7fa6b54749a88c09bb239071b5" align="left">
                  <p id="paragraph-8c9d9197d4d9450a970006526323245e"> Positive</p>
                </td>
                <td id="table-cell-b253b285e59d4c7c9b9294856c4cea1c" align="left">
                  <p id="paragraph-de615b13c1584a5c8a0d27f11a3f2e80"> Negative</p>
                </td>
                <td id="table-cell-c2df99dba34e40879674ba730e321fc1" align="left">
                  <p id="paragraph-02264945efbb4069afa500d780a535fd"> <italic id="e-7049b8867d18">Bacillus nakamurai</italic> ferments sorbitol (medium turns yellow); <italic id="e-44517ebea0e7">Bacillus licheniformis</italic> does not.</p>
                </td>
              </tr>
              <tr id="table-row-3bd9fb6b544e4c059832c83f6c04cc91">
                <td id="table-cell-6550c12dc94a43d2b56e55ada60f7ced" align="left">
                  <p id="paragraph-5637037269c04ad98b76cd0ebfdc806f"> Sucrose Fermentation Test</p>
                </td>
                <td id="table-cell-4658b5999acd40899208cdd89f1ceff5" align="left">
                  <p id="paragraph-c4e9db8a845b46c5999c692b37b1856e"> Negative</p>
                </td>
                <td id="table-cell-6b6c100302ca492698a6d8868bf4895f" align="left">
                  <p id="paragraph-a87a3b4294fc472690a85f021b99fd63"> Positive</p>
                </td>
                <td id="table-cell-72016de45ca440ae910c207fe3c3e543" align="left">
                  <p id="paragraph-2e5c87cedb90435a8d86fbd6e56d082e"> <italic id="e-d6536cb69212">Bacillus nakamurai</italic> does not ferment sucrose; <italic id="e-fcfa701401cc">Bacillus licheniformis</italic> does.</p>
                </td>
              </tr>
            </tbody>
          </table>
        </table-wrap>
      </sec>
      <sec>
        <title id="t-5c766b51cb13">3.2 <bold id="strong-b82e01217dd6401e9b02005308febef7">Genomic DNA Isolation, 16S rDNA Sequencing, and Phylogenetic Analysis of the Isolates</bold></title>
        <p id="paragraph-05cb1b030cbd46b5882cb23a6eb34c78">Genomic DNA and 16S rDNA amplicons appeared as sharp bands on agarose gel. Sequencing revealed 690 and 862 nucleotide-long contigs of the 16S rRNA genes for strains TR1 and TR2, respectively. Strain TR1 exhibited 98.70% sequence similarity to <italic id="e-6d35a101b612">Bacillus nakamurai</italic>, and strain TR2 showed 99.65% similarity to <italic id="e-b23c9701e2b3">Bacillus licheniformis</italic>. The sequences were submitted to GenBank, NCBI, with <italic id="e-a3c2292c0de8">Bacillus nakamurai</italic> strain RABN1 and <italic id="e-9d3dc7c4d4f5">Bacillus licheniformis</italic> strain TWR2 assigned accession numbers PQ044631 and PQ056784, respectively. A phylogenetic tree was constructed using the Neighbor-Joining method with 1000 bootstrap replicates, and evolutionary distances were computed using the Maximum Composite Likelihood method.</p>
        <p id="p-58772a166744">The analysis included 29 nucleotide sequences and 3050 positions, conducted in MEGA11 (<xref id="x-dacd730c636b" rid="figure-63013c42c51e4b7488a22cf7271500c4" ref-type="fig">Figure 1</xref>).</p>
        <fig id="figure-63013c42c51e4b7488a22cf7271500c4" orientation="portrait" fig-type="graphic" position="anchor">
          <label>Figure 1 </label>
          <caption id="caption-498a999737fe45d3af208a3f0aed4b5e">
            <title id="title-96b6f9867f59453a8ffacc21bf0e55a1">
              <bold id="s-a5f8d5c61e5b">Phylogenetic Analysis<bold id="strong-89ecc1636b6a4ea1bc08e672158baceb"/></bold>
            </title>
          </caption>
          <graphic id="graphic-7feec8b3a794483f939ce7e3f2d7aaca" xlink:href="https://s3-us-west-2.amazonaws.com/typeset-prod-media-server/439eea42-975f-4e6d-8aa4-86656ce01f76image1.png"/>
        </fig>
      </sec>
      <sec>
        <title id="t-00880a8801ec">3.3 <bold id="strong-ec1dec7adc5740d9a31672516eab88c6">Extraction and Spectral Analysis of Carotenoids and Quinones</bold></title>
        <p id="paragraph-87f66cded253400496d251e1e3f308c1">Carotenoids and quinones from the strains were efficiently extracted using ethyl acetate, acetone, and ethanol. The resulting extracts were designated as TR1E7A3, TR1Et10, TR1E5A5, TR2E2A8, TR2E8A2 and TR2Et10, corresponding to the solvents used and the solubility of the compounds. Spectral analysis of the carotenoid extracts revealed absorption maxima for TR1E7A3, TR1E5A5 and TR2Et10 at 470 nm, 473 nm and 478 nm in the visible range. In contrast, the quinone extracts TR1Et10, TR2E8A2 and TR2E2A8 showed absorption maxima at 265 nm, 273 nm and 288 nm, respectively (<xref id="x-8f4218cf0fe1" rid="figure-bf1a56646e8c451183f56ca86f2d14af" ref-type="fig">Figure 2</xref>).</p>
        <fig id="figure-bf1a56646e8c451183f56ca86f2d14af" orientation="portrait" fig-type="graphic" position="anchor">
          <label>Figure 2 </label>
          <caption id="caption-f9b0c379d1884a53bc4b3061c90d6890">
            <title id="title-7ee2bac14c3f415494422c3ace082944">
              <bold id="s-b23f6b293e8f">Spectral Analysis of Carotenoids and Quinones<bold id="strong-9c069290abcb42e0ab7dbef0f05eec8f"/></bold>
            </title>
          </caption>
          <graphic id="graphic-402409bc860549d09b8c52416a5eec46" xlink:href="https://s3-us-west-2.amazonaws.com/typeset-prod-media-server/439eea42-975f-4e6d-8aa4-86656ce01f76image2.png"/>
        </fig>
      </sec>
      <sec>
        <title id="t-dc889eb1103f">3.4 <bold id="strong-23e4f956b5de4572a8334a9787b5fa9c">DPPH assay, hydroxyl radical assay,</bold><bold id="strong-238ca20f34e44997943478cae0700052"> nitric oxide assay and FRAP assay</bold></title>
        <p id="paragraph-74a24c4fb4424de69969533c6758f19c">All of the extracts showed positive result in DPPH radical scavenging assay, hydroxyl radical scavenging assay, nitric oxide radical scavenging assay, Ferric reducing antioxidant power assay and the percentage inhibition property increased with increasing concentrations of extract. Amongst all the samples, carotenoids dissolved in ethyl acetate and acetone showed greater scavenging activity than ethanol. While in case of quinone extracts ethanol extracts activity was higher in comparison to ethyl acetate and acetone extracts. Scavenging activity of 1mg extracts of TR1E5A5 and TR1E7A3 showed similar DPPH scavenging activity of 90.38 ±0.64<bold id="strong-e0c110418e83442e987c76f3ad4e7e41">, </bold>and 89.25±0.53% and TR1Et10 of 83.40±0.53% respectively, while that of TR2E8A2 and TR2E2A8 showed slightly lower activity of 82.44 ±0.64, 80.33 ±0.64 and TR2Et10 of 93.30±0.53%. The hydroxyl radical scavenging activity was 78.22±0.2% in case of TR1Et10, 79.66±1.2% in case of TR2Et10, 70.44±0.2% in case of TR1E7A3, 74.32±1.2% in case of TR1E5A5, 70.24±1.2% in case of TR2E8A2 and 68.54±1% in case of TR2E2A8.  Ethanol-dissolved TR2Et10 and TR1Et10 extract showed a high amount of nitric oxide radical scavenging activity of 87.44±1.15% and<bold id="strong-3f84ab7647ea41b79287dfcece297d1e"> </bold>88.22±1.15<bold id="strong-e0a8d1c20c4442bf82db8a71644007c2">% </bold>while that of<bold id="strong-2fb16651f3ac4e889302f08704b313a0"> </bold>TR2E2A8, TR1E5A5, TR2E8A2 and TR1E7A3 as 77.34±1.15%, 75.55±1.15%, 79.66±1.15% and 72.84±1.15%. </p>
        <p id="p-26af9aebefb6">Ferric reducing antioxidant power activity was 84.38±1.15% of TR1Et10,<bold id="strong-8c4841b160a24fe29c7a6665838a74aa"> </bold>85.68±1.2% of TR2Et10, 70.44±1.2% of TR1E5A5,<bold id="strong-873d7c40161644599717ff7a2193fb4a"> </bold>75.05±1.2% of TR2E8A2, 74.23±1% of TR1E7A3 and 76.88±0.2% of TR2E2A8. Details of the result are given in <xref id="x-0df8f9bb2382" rid="figure-c4795cb55c734a5b9b331ddf57eb2011" ref-type="fig">Figure 3</xref>.</p>
        <fig id="figure-c4795cb55c734a5b9b331ddf57eb2011" orientation="portrait" fig-type="graphic" position="anchor">
          <label>Figure 3 </label>
          <caption id="caption-d84c85a633494b67be4bfd7da017bea5">
            <title id="title-9e83f8b79b1f43289c6a34276a913e5c">
              <bold id="strong-4927ffb086a7413f9812fbc84de0d06c">Antioxidant assay</bold>
            </title>
          </caption>
          <graphic id="graphic-7a66b4c489914373ab2fdcf7c295cfc7" xlink:href="https://s3-us-west-2.amazonaws.com/typeset-prod-media-server/439eea42-975f-4e6d-8aa4-86656ce01f76image3.png"/>
        </fig>
      </sec>
      <sec>
        <title id="t-08c43089bd84">3.5 <bold id="strong-0fd800b7925e4d0e92c5dbd44bda9a7c">Phosphomolybdenum</bold><bold id="strong-87bc16c03cb84fdd9b25677664120464"> assay for Total Antioxidant Capacity</bold></title>
        <p id="paragraph-4458be2444224bb29c1b8c413afae81c">The total antioxidant capacity assay was seen to be much higher in all the extracts particularly that of TR1Et10<bold id="strong-85ce63a1b6d34c97935f6b045cda444c"> </bold>and<bold id="strong-7fdf46af3f454afe8e2ef538ce8cb219"> </bold>TR2Et10, which increased with increasing concentrations of extract. 1mg of extracts of TR1E7A3, TR1Et10, TR1E5A5, TR2E2A8, TR2E8A2 and TR2Et10 showed total antioxidant capacities of 84.12±0.94<bold id="strong-6a24a0d421d94816ac466920cb6617ab">, </bold>92.38±1.2<bold id="strong-b351ca78d2cc4058a6aae28ebe858f7d">, </bold>82.34±0.94, 72.84±1.2<bold id="strong-da4c5d80d27842a083b258d115b655fb">, </bold>71.66±0.94 and 93.24±1.2, respectively (<xref id="x-460c79ddfc75" rid="figure-35902c25fdaa4a8bafdfe1924cfa30d0" ref-type="fig">Figure 4</xref>).<bold id="strong-51ebc34b1fb2443b8c21a394cd2012f6"> </bold></p>
        <fig id="figure-35902c25fdaa4a8bafdfe1924cfa30d0" orientation="portrait" fig-type="graphic" position="anchor">
          <label>Figure 4 </label>
          <caption id="caption-06e959b020e5400c809623a9513200b9">
            <title id="title-5082fa3300ff4191b7e9b17f67de3a15">
              <bold id="strong-0fd654481e3f42af864f63d572d022b6">Total antioxidant capcity</bold>
            </title>
          </caption>
          <graphic id="graphic-aa77adcc830a4bcf9db5201c699c700c" xlink:href="https://s3-us-west-2.amazonaws.com/typeset-prod-media-server/439eea42-975f-4e6d-8aa4-86656ce01f76image4.png"/>
        </fig>
      </sec>
    </sec>
    <sec>
      <title id="title-357b2dcbf19249a3b01154cccf3d6c4a">4 Discussion</title>
      <p id="paragraph-91f46b997a6b4fa7b4def63d3a6c9f13">This study highlights the considerable antioxidant potential of thermophilic bacteria isolated from the Tatapani Hot Spring, emphasizing their significance as novel sources of natural antioxidants. The isolates, identified as <italic id="e-9a110846212d">Bacillus nakamurai</italic> (TR1) and <italic id="e-c60d5d728deb">Bacillus licheniformis</italic> (TR2), exhibited remarkable antioxidant activities, which can be attributed to their adaptation to extreme thermal conditions. The DPPH radical scavenging assay demonstrated exceptional activity, with TR2Et10 achieving a scavenging effect of 93.30%. This high activity suggests that the ethanol extract of TR2 possesses potent radical-neutralizing properties, likely owing to the presence of specific antioxidant compounds that effectively quench DPPH radicals. Both TR1Et10 and TR2Et10 showed significant hydroxyl radical scavenging activity, with TR1Et10 exhibiting 87.21% and TR2Et10 showing 87.68%, indicating their ability to mitigate oxidative damage caused by hydroxyl radicals. These findings align with previous studies reporting the high antioxidant potential of <italic id="e-71156108d3cf">Bacillus</italic> species, often linked to their production of secondary metabolites with strong antioxidant properties. The nitric oxide scavenging activity was notably high in TR2Et10 (87.44%) and TR1Et10 (88.22%), underscoring their potential to counteract inflammation and associated oxidative stress. The high reducing power observed in the FRAP assay, particularly in TR1Et10 and TR2Et10, further corroborates their capacity to act as effective electron donors, neutralizing free radicals and reducing oxidative damage. The observed variation in antioxidant activities across different solvents highlights the critical role of solvent choice in extracting bioactive compounds. Ethanol emerged as the most effective solvent, likely due to its ability to dissolve a wide range of polar and non-polar compounds, thereby maximizing the extraction of antioxidant agents. This finding aligns with the understanding that solvent polarity is essential for extraction efficiency of bioactive compounds, with ethanol being particularly effective in extracting a broad spectrum of antioxidant compounds. The study underscores the importance of thermophilic bacteria from extreme environments as promising sources of novel antioxidants. These bacteria have adapted to survive in harsh conditions, leading to the production of robust antioxidant compounds. The high antioxidant activity observed in <italic id="e-03f9956074be">Bacillus nakamurai</italic> and <italic id="e-d3b29eec748c">Bacillus licheniformis</italic> extracts can be linked to their production of secondary metabolites including carotenoids and quinones. Carotenoids are known for their ability to quench singlet oxygen and stabilize free radicals, while quinones participate in redox cycling, neutralizing reactive oxygen species and maintaining cellular redox homeostasis. Future research should focus on the detailed biochemical characterization of these bioactive compounds, including the isolation and identification of active constituents, as well as exploring their stability and efficacy in various applications. Investigations should also examine the potential synergistic effects of these compounds with other known antioxidants, which could enhance their therapeutic effectiveness. Additionally, optimizing the extraction processes to maximize yield and activity, as well as evaluating the scalability of these processes for industrial applications, will be crucial steps toward the development of new antioxidant-rich products. In conclusion, the findings from this study validate the potential of thermophilic bacteria from extreme environments as sources of novel antioxidants. These insights pave the way for the development of new antioxidant-rich products with applications in pharmaceuticals, food preservation, and other industries, leveraging the unique properties of these extremophiles. Further research and development in this area could lead to significant advancements in health sciences and biotechnological innovations.</p>
    </sec>
    <sec>
      <title id="title-564a47c77dd741aabc86afb7a211da7a">5 Conclusion</title>
      <p id="paragraph-69fb4a3a6c5b428c9cf7408f61f58bf2">This study effectively highlights the significant antioxidant potential of thermophilic bacteria obtained from Tatapani Hot Spring, particularly <italic id="e-f20d6f40cd23">Bacillus nakamurai</italic> (TR1) and <italic id="e-2c3a0ed853d7">Bacillus licheniformis</italic> (TR2). Both isolates demonstrated exceptional antioxidant activities across multiple assays, including DPPH radical scavenging, hydroxyl radical scavenging, nitric oxide scavenging, and reducing power, with TR2 exhibiting the highest overall activity. These findings underscore the promising role of thermophilic bacteria as natural sources of potent antioxidants, driven by their adaptation to extreme thermal environments. The differential effectiveness of ethanol as a solvent for extracting bioactive compounds suggests that solvent choice plays a vital role in maximizing antioxidant recovery. This study not only establishes a foundation for the use of extremophilic microorganisms in developing antioxidant-rich products but also opens avenues for further research into the specific bioactive compounds responsible for these activities. Future studies should focus on elucidating the mechanisms behind these antioxidant properties, optimizing extraction processes, and exploring potential applications in diverse fields such as pharmaceuticals, food technology, and cosmetics. In summary, the thermophilic bacterial isolates sourced from Tatapani Hot Spring represent a valuable resource for identifying novel antioxidants and developing innovative solutions to combat oxidative stress and related diseases. Their unique properties and robust antioxidant activities present significant opportunities for advancing both scientific knowledge and practical applications in various industries.</p>
      <sec>
        <title id="t-c53f2f38951e">
          <bold id="s-ca8d3e5bb47b">Acknowledgments</bold>
        </title>
        <p id="paragraph-7016e2acffdb454ea9f21830d3d874eb">The authors wish to express their gratitude to the Department of Biotechnology, Guru Ghasidas Vishwavidyalaya for providing necessary facilities to carry out the work. </p>
      </sec>
      <sec>
        <title id="t-bc01f4405bc0">
          <bold id="strong-44d0f33721e44636a59d30616de0c59a">Appendices</bold>
        </title>
        <table-wrap id="table-wrap-06545da64d8843e3a895bdaf03f698df" orientation="portrait">
          <label>Table 0</label>
          <table id="table-e7608f5cbd49413f9effe4544233ad2b" rules="rows">
            <colgroup>
              <col width="25.31"/>
              <col width="74.68999999999998"/>
            </colgroup>
            <tbody id="table-section-60b2ba6b722a487a89393946654be493">
              <tr id="table-row-06d1a7cffe274025a52c9a9ceb2cef4c">
                <td id="table-cell-a54740929bab46ca9b837880d9cfd4a3" align="left">
                  <p id="paragraph-2c785d58e21c4fa2a6fede990cabe246">
                    <bold id="strong-35dfd0a8026f4f56bfbf9ccffb6e7b56">Table Number</bold>
                  </p>
                </td>
                <td id="table-cell-992f28ab83ab49d0b023d548f3631e61" align="left">
                  <p id="paragraph-30c2f2c5f0624739b371e58132306c26"> <bold id="strong-1b1735bec2e84672bcf3dc7be437ba5b">Legend</bold></p>
                </td>
              </tr>
              <tr id="table-row-245aeb18ef1247818792164ad01271a6">
                <td id="table-cell-3f54b4050a9a4a5ba3484da4915e3873" align="left">
                  <p id="paragraph-94bbcf2a271b46faa806bed428392b1a"> <bold id="strong-745f0d80098746bf917c00ef0514e054">Table 1</bold></p>
                </td>
                <td id="table-cell-44e58ada46b6445b9f59a30d1ac58983" align="left">
                  <p id="paragraph-1e4d2614aa5f48aaadd60337594cbb98">This table presents the observed morphological and cultural features of various bacterial strains. The characteristics include colony morphology, Gram staining, motility, and growth requirements.</p>
                </td>
              </tr>
              <tr id="table-row-4f5f0746f1db4f1083b994e73ab8584e">
                <td id="table-cell-b41e0d2af66747b19ef11d1fd9b34f75" align="left">
                  <p id="paragraph-c74d83a97d53414d92f7920079312d4a"> <bold id="strong-d814c2282e854f22bfee65e6115887ee">Table 2</bold></p>
                </td>
                <td id="table-cell-812596249ed84bdca63c826d1be0f567" align="left">
                  <p id="paragraph-38978b57a09247dbbca4ef8e56a91167">This table presents the results of various biochemical tests performed on <italic id="e-5a3a995ab000">Bacillus nakamurai</italic> (TR1) and <italic id="e-6583ce5468e6">Bacillus licheniformis</italic> (TR2). The tests assess the ability of these strains to utilize different substrates, produce enzymes, and ferment various sugars. The results help differentiate the two strains based on their metabolic activities.</p>
                </td>
              </tr>
            </tbody>
          </table>
        </table-wrap>
        <table-wrap id="table-wrap-e10177f1449a495f915a8bdaac2dca20" orientation="portrait">
          <label>Table 0</label>
          <table id="table-ce4ffe8428f04c0f8d0b5848aaff771a" rules="rows">
            <colgroup>
              <col width="25.300000000000008"/>
              <col width="74.69999999999999"/>
            </colgroup>
            <tbody id="table-section-503c2070c53d43998d84295d8c8fea0f">
              <tr id="table-row-f043cfc869274384a0fc3583cb58259c">
                <td id="table-cell-b3bc9c41518d48b6b4155b7df4ac8889" align="left">
                  <p id="paragraph-8b1ecf42b8ba42aa986381e1874c036b">
                    <bold id="strong-2d924484e7774889bca8a0153cd276aa">Figure Number</bold>
                  </p>
                </td>
                <td id="table-cell-84a8fa64177341efaa6b52332aed96d7" align="left">
                  <p id="paragraph-0b7770cc819a46cc91e9be69563a4670">
                    <bold id="strong-eccaa43606f647b7b6ed3801c34393f6">Legend</bold>
                  </p>
                </td>
              </tr>
              <tr id="table-row-242f9410b9094c3cac1a15f12e4b2a68">
                <td id="table-cell-c51ec66aad8845d6a7e38efbb891a926" align="left">
                  <p id="paragraph-b1d0ba6303704a4486e339644c57eaca"> <bold id="strong-675300029e7d4680b46be057953e80a9">Figure 1</bold></p>
                </td>
                <td id="table-cell-9e97ee2fd4e749448b619f01a168995b" align="left">
                  <p id="paragraph-f1b783ac024540eb98fbce5595beca0d">Evolutionary analyses were performed in MEGA11 using the Neighbour-Joining method. The bootstrap consensus tree, based on 1000 replicates, is used to depict the evolutionary history of the analyzed taxa analysed. The evolutionary distances were computed using the Maximum Composite Likelihood method.</p>
                </td>
              </tr>
              <tr id="table-row-5efde5a352634b6086c8e0455d284f63">
                <td id="table-cell-f1ec356042e948aa91018b3a5f9368b5" align="left">
                  <p id="paragraph-f79837cda6ee4676b8ec8f324165da05"> <bold id="strong-f2eddabac6fb40cebbd7706f958a4e49">Figure 2</bold></p>
                </td>
                <td id="table-cell-06681e586afc40f2919a758ec6e2f5e6" align="left">
                  <p id="paragraph-7369b836f4e54428b9afefed1c34757a">The absorption spectra of carotenoid extracts of TR1E5A5, TR1E7A3 and TR2Et10 with absorption maxima of 448 nm,425 nm and 478 nm are given in a, b and c and that of quinone extracts of TR2E2A8, TR2E8A2 and TR1Et10 with absorption maxima of 288 nm, 273 nm and 265 nm are given in d, e and f, respectively.</p>
                </td>
              </tr>
              <tr id="table-row-59c50349eb3f46ceaac1fd186d42ce10">
                <td id="table-cell-e1ba3901bfa1445a8ff7d66b82705f41" align="left">
                  <p id="paragraph-4c898097dcca406ebcd2c184136101c5"> <bold id="strong-c957b3c0efd340f888529013ff406659">Figure 3</bold></p>
                </td>
                <td id="table-cell-5d7f342a8dee40129e93de8bfa4ecbfa" align="left">
                  <p id="paragraph-83eb2edcb822410c9e85f75193b6013a">Determination of percent scavenging activity of different concentrations of the carotenoid and quinone extracts of TR1 (<italic id="e-6de16e12c630">Bacillus nakamurai</italic>) and TR2 (<italic id="e-b797a8e2b8bc">Bacillus licheniformis</italic>)- TR1E7A3, TR1Et10, TR1E5A5, TR2E2A8, TR2E8A2 and TR2Et10, dissolved in ethyl acetate (E), acetone (A) and ethanol (Et) of by DPPH assay (DH), Hydroxyl radical assay (HO), nitric oxide assay (NO) and FRAP assay (FP). Coloured lines indicate different concentrations: red—0.2 mg, pink—0.4 mg, yellow—0.6 mg, green-0.8 mg and blue—1.0 mg. The abbreviations are in the sequence of ‘organism-solvent’.</p>
                </td>
              </tr>
              <tr id="table-row-d76e74d70d2c44e89e69b66004470204">
                <td id="table-cell-815899f60c6c4901977dc696e2662b07" align="left">
                  <p id="paragraph-d202f0cdc208404ea0b3e2411ab30e66"> <bold id="strong-1d4fe339ce0b49388f087b10338f4bff">Figure 4</bold></p>
                </td>
                <td id="table-cell-b0eae1cb97f44389b5092f55f200827d" align="left">
                  <p id="paragraph-6157260e823a48c29b36bdb94b1fee1c">Determination of percent scavenging activity of different concentrations of the carotenoid and quinone extracts of TR1 (<italic id="e-13ed0abc7f4d">Bacillus nakamurai</italic>) and TR2 (<italic id="e-8f64746b3790">Bacillus licheniformis</italic>)- TR1E7A3, TR1Et10, TR1E5A5, TR2E2A8, TR2E8A2 and TR2Et10, dissolved in ethyl acetate (E), acetone (A) and ethanol (Et) of by DPPH assay (DH), Hydroxyl radical assay (HO), nitric oxide assay (NO) and FRAP assay (FP). Coloured lines indicate different concentrations: red—0.2 mg, pink—0.4 mg, yellow—0.6 mg, green-0.8 mg and blue—1.0 mg. The abbreviations are in the sequence of ‘organism-solvent’.</p>
                </td>
              </tr>
            </tbody>
          </table>
        </table-wrap>
        <p id="paragraph-a62d4731879f498a980ae14cec5f01f4"/>
      </sec>
    </sec>
  </body>
  <back>
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